Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase fumd | DM102_00910 | Not Available | Negative | 182635 - 182844 | 7907.85 |
| pyruvate kinase | DM102_00915 | Not Available | Positive | 183401 - 184813 | 50732.5 |
| murein lipoprotein | DM102_00920 | Not Available | Positive | 185124 - 185360 | 8323.95 |
| lysm peptidoglycan-binding domain-containing protein | DM102_00925 | Not Available | Negative | 185424 - 186428 | 36026.4 |
| cysteine desulfuration protein sufe | DM102_00930 | Not Available | Negative | 186577 - 186993 | 15791.2 |
| cysteine desulfurase | DM102_00935 | Not Available | Negative | 187006 - 188226 | 44454.4 |
| signal peptide peptidase sppa | DM102_00940 | Not Available | Negative | 188223 - 189494 | 46812.4 |
| fe-s cluster assembly atpase sufc | DM102_00945 | Not Available | Negative | 189469 - 190215 | 27603.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 191579 - 191675 | Not Available |
| fe-s cluster assembly protein sufb | DM102_00950 | Not Available | Negative | 190225 - 191712 | 54776.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





