Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | DM102_27645 | Not Available | Negative | 5254263 - 5255225 | 35261.0 |
| udp-n-acetylmuramate dehydrogenase | DM102_27650 | Not Available | Negative | 5255222 - 5256250 | 37877.3 |
| replication initiation protein | DM102_27660 | Not Available | Positive | 5256580 - 5257281 | 27122.7 |
| conjugal transfer protein | DM102_27665 | Not Available | Negative | 5257539 - 5259686 | 81346.3 |
| mobilization protein | DM102_27670 | Not Available | Positive | 5259865 - 5260119 | 9503.72 |
| hypothetical protein | DM102_27685 | Not Available | Negative | 5260880 - 5261206 | 12588.2 |
| type iv secretion protein rhs | DM102_27695 | Not Available | Negative | 5262550 - 5262825 | 9890.71 |
| type iv secretion protein rhs | DM102_27700 | Not Available | Negative | 5262810 - 5262968 | 5594.76 |
| sel1 repeat family protein | DM102_27705 | Not Available | Negative | 5263150 - 5263617 | 18298.1 |
| rhs repeat-associated core domain-containing protein | DM102_27710 | Not Available | Negative | 5263629 - 5264277 | 23981.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





