Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin outer membrane usher protein safc | DM102_26755 | Not Available | Negative | 5133509 - 5136091 | 93997.9 |
| chaperone protein afab | DM102_26760 | Not Available | Negative | 5136131 - 5136928 | 28563.1 |
| afa-iii adhesin operon regulatory protein | DM102_26765 | Not Available | Negative | 5137168 - 5137473 | 11744.1 |
| f1845 fimbrial adhesin operon regulatory protein daaf | DM102_26770 | Not Available | Positive | 5138277 - 5138504 | 8544.3 |
| duf945 domain-containing protein | DM102_26785 | Not Available | Negative | 5140547 - 5140865 | 12501.1 |
| hypothetical protein | DM102_26795 | Not Available | Negative | 5141086 - 5141496 | 15097.3 |
| hypothetical protein | DM102_26800 | Not Available | Negative | 5141512 - 5142195 | 25170.2 |
| patatin-like phospholipase family protein | DM102_26805 | Not Available | Negative | 5142331 - 5143401 | 38243.2 |
| chemotaxis protein | DM102_26810 | Not Available | Negative | 5143398 - 5144303 | 33881.9 |
| dgtpase | DM102_26815 | Not Available | Negative | 5144300 - 5146696 | 90187.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





