Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | DM102_26010 | Not Available | Positive | 5030161 - 5030793 | 23659.8 |
| conjugal transfer protein trau | DM102_26015 | Not Available | Positive | 5030790 - 5031782 | 36766.6 |
| hypothetical protein | DM102_26020 | Not Available | Positive | 5031806 - 5032117 | 12072.2 |
| type-f conjugative transfer system pilin assembly protein trbc | DM102_26025 | Not Available | Positive | 5032114 - 5032764 | 23947.7 |
| type-f conjugative transfer system mating-pair stabilization protein tran | DM102_26030 | Not Available | Positive | 5032761 - 5034611 | 66720.3 |
| conjugal transfer protein trbe | DM102_26035 | Not Available | Positive | 5034635 - 5034895 | 9806.07 |
| type-f conjugative transfer system pilin assembly protein traf | DM102_26040 | Not Available | Positive | 5034858 - 5035631 | 29213.4 |
| is5-like element iskpn26 family transposase | DM102_26045 | Not Available | Positive | 5035761 - 5036741 | 37830.6 |
| abc transporter | DM102_26050 | Not Available | Negative | 5036780 - 5036863 | 3043.72 |
| is1 family transposase | DM102_26055 | Not Available | Positive | 5036896 - 5036966 | 2385.83 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





