Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein tral | DM102_25960 | Not Available | Positive | 5022204 - 5022515 | 11890.6 |
| protein trae | DM102_25965 | Not Available | Positive | 5022537 - 5023103 | 21225.6 |
| type-f conjugative transfer system secretin trak | DM102_25970 | Not Available | Positive | 5023147 - 5023818 | 23473.9 |
| conjugal transfer protein trab | DM102_25975 | Not Available | Positive | 5023818 - 5025269 | 51060.4 |
| conjugal transfer protein trap | DM102_25980 | Not Available | Positive | 5025238 - 5025825 | 22170.8 |
| duf2689 domain-containing protein | DM102_25985 | Not Available | Positive | 5025764 - 5026123 | 12706.5 |
| type iv conjugative transfer system protein trav | DM102_25990 | Not Available | Positive | 5026123 - 5026638 | 18420.2 |
| conjugal transfer protein trar | DM102_25995 | Not Available | Positive | 5026773 - 5026994 | 8313.99 |
| type iv secretion system protein trac | DM102_26000 | Not Available | Positive | 5027154 - 5029781 | 99201.2 |
| type-f conjugative transfer system protein trbi | DM102_26005 | Not Available | Positive | 5029778 - 5030164 | 14148.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





