Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' ssdna/rna exonuclease tatd | DM102_25860 | Not Available | Positive | 5005410 - 5006192 | 29054.7 |
| transcription/translation regulatory transformer protein rfah | DM102_25865 | Not Available | Negative | 5006189 - 5006677 | 18359.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | DM102_25870 | Not Available | Positive | 5006844 - 5008337 | 55627.9 |
| nad(p)h-flavin reductase | DM102_25875 | Not Available | Positive | 5008383 - 5009084 | 26227.4 |
| acetyl-coa c-acyltransferase fada | DM102_25880 | Not Available | Negative | 5009275 - 5010438 | 40904.8 |
| fatty acid oxidation complex subunit alpha fadb | DM102_25885 | Not Available | Negative | 5010448 - 5012637 | 79624.6 |
| xaa-pro dipeptidase | DM102_25890 | Not Available | Positive | 5012827 - 5014158 | 50178.9 |
| impact family protein | DM102_25895 | Not Available | Positive | 5014158 - 5014772 | 21708.1 |
| trk system potassium uptake protein trkh | DM102_25900 | Not Available | Positive | 5014811 - 5016262 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | DM102_25905 | Not Available | Positive | 5016274 - 5016819 | 21190.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





