Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | DM102_25650 | Not Available | Negative | 4970924 - 4972297 | 50545.6 |
| conjugal transfer protein trbf | DM102_25655 | Not Available | Negative | 4972284 - 4972709 | 16502.2 |
| conjugal transfer protein trbj | DM102_25660 | Not Available | Negative | 4972657 - 4973037 | 14466.9 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | DM102_25665 | Not Available | Negative | 4972934 - 4973479 | 20013.2 |
| type-f conjugative transfer system pilin chaperone traq | DM102_25670 | Not Available | Negative | 4973466 - 4973750 | 10754.3 |
| conjugal transfer protein trba | DM102_25675 | Not Available | Negative | 4973877 - 4974197 | 11994.3 |
| is1 family transposase | DM102_25680 | Not Available | Negative | 4974245 - 4974356 | 4273.23 |
| is1 family transposase | DM102_25685 | Not Available | Negative | 4974357 - 4974428 | 2385.83 |
| Trna-asn | Not Available | Not Available | Positive | 4975331 - 4975406 | Not Available |
| l,d-transpeptidase | DM102_25700 | Not Available | Negative | 4975462 - 4976394 | 34349.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





