Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | DM102_25425 | Not Available | Negative | 4931452 - 4932522 | 38933.0 |
| d-amino acid dehydrogenase small subunit | DM102_25430 | Not Available | Negative | 4932532 - 4933830 | 47610.1 |
| spovr family protein | DM102_25435 | Not Available | Positive | 4934160 - 4935692 | 60803.1 |
| fatty acid metabolism transcriptional regulator fadr | DM102_25440 | Not Available | Negative | 4935742 - 4936461 | 26970.2 |
| na(+)/h(+) antiporter nhab | DM102_25445 | Not Available | Positive | 4936683 - 4938224 | 56678.8 |
| disulfide bond formation protein b | DM102_25450 | Not Available | Positive | 4938370 - 4938900 | 20143.3 |
| translesion error-prone dna polymerase v subunit umuc | DM102_25455 | Not Available | Negative | 4938946 - 4940214 | 47534.2 |
| protein umud | DM102_25460 | Not Available | Negative | 4940214 - 4940633 | 15064.2 |
| hemolysin hlye | DM102_25465 | Not Available | Positive | 4941005 - 4941916 | 33733.2 |
| ycgn family cysteine cluster protein | DM102_25470 | Not Available | Negative | 4942123 - 4942584 | 17911.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





