Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | DM102_24535 | Not Available | Negative | 4786062 - 4786847 | 28630.2 |
| duf3592 domain-containing protein | DM102_24540 | Not Available | Negative | 4786844 - 4787305 | 17454.9 |
| spermidine/putrescine-binding periplasmic protein | DM102_24545 | Not Available | Negative | 4787363 - 4788409 | 38855.0 |
| spermidine/putrescine abc transporter permease | DM102_24550 | Not Available | Negative | 4788406 - 4789200 | 29112.7 |
| hypothetical protein | DM102_24700 | Not Available | Positive | 4806700 - 4806919 | 8033.84 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DM102_24710 | Not Available | Positive | 4807357 - 4808946 | 57329.5 |
| phosphoribosylamine--glycine ligase | DM102_24715 | Not Available | Positive | 4808958 - 4810247 | 45973.0 |
| sigma-54-dependent fis family transcriptional regulator | DM102_24720 | Not Available | Negative | 4810244 - 4811569 | 48329.4 |
| two-component system sensor histidine kinase zras | DM102_24725 | Not Available | Negative | 4811566 - 4812963 | 51164.1 |
| zinc resistance-associated protein | DM102_24730 | Not Available | Positive | 4813070 - 4813198 | 5008.96 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





