Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | DM102_24385 | Not Available | Negative | 4748454 - 4750214 | 65640.9 |
| duf421 domain-containing protein | DM102_24390 | Not Available | Positive | 4750344 - 4751036 | 26269.4 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | DM102_24395 | Not Available | Positive | 4751235 - 4752323 | 39856.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DM102_24400 | Not Available | Positive | 4752394 - 4753677 | 46098.5 |
| metalloprotease | DM102_24405 | Not Available | Positive | 4753846 - 4754610 | 26724.6 |
| cytidylate kinase | DM102_24410 | Not Available | Positive | 4754783 - 4755466 | 24747.8 |
| 30s ribosomal protein s1 | DM102_24415 | Not Available | Positive | 4755577 - 4757250 | 61161.5 |
| integration host factor subunit beta | DM102_24420 | Not Available | Positive | 4757410 - 4757694 | 10651.8 |
| comec family protein | DM102_24425 | Not Available | Positive | 4757901 - 4760165 | 84554.9 |
| lipid a export atp-binding/permease msba | DM102_24430 | Not Available | Positive | 4760202 - 4761950 | 64464.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





