Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb family transcriptional regulator | DM102_23860 | Not Available | Positive | 4652999 - 4654045 | 36907.1 |
| endonuclease viii | DM102_23865 | Not Available | Negative | 4654042 - 4654833 | 29831.8 |
| lamb/ycsf family protein | DM102_23870 | Not Available | Negative | 4654869 - 4655603 | 25934.0 |
| allophanate hydrolase subunit 2 family protein | DM102_23875 | Not Available | Negative | 4655593 - 4656525 | 34432.6 |
| hypothetical protein | DM102_23880 | Not Available | Negative | 4656519 - 4657175 | 23948.0 |
| nif3-like dinuclear metal center hexameric protein | DM102_23885 | Not Available | Negative | 4657198 - 4657941 | 26880.0 |
| mfs transporter | DM102_23890 | Not Available | Positive | 4658212 - 4659693 | 54164.1 |
| deoxyribodipyrimidine photo-lyase | DM102_23895 | Not Available | Negative | 4659736 - 4661154 | 53820.9 |
| duf1722 domain-containing protein | DM102_23900 | Not Available | Negative | 4661151 - 4661660 | 20391.4 |
| rhs repeat protein | DM102_23910 | Not Available | Negative | 4662677 - 4663288 | 23098.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





