Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | DM102_23705 | Not Available | Positive | 4620491 - 4621402 | 34718.2 |
| glycine--trna ligase subunit beta | DM102_23710 | Not Available | Positive | 4621412 - 4623481 | 76792.1 |
| is3 family transposase | DM102_23715 | Not Available | Positive | 4623779 - 4624085 | 11580.2 |
| is1 family transposase | DM102_23720 | Not Available | Negative | 4624086 - 4624157 | 2385.83 |
| methylaspartate mutase subunit s | DM102_23725 | Not Available | Positive | 4624199 - 4624645 | 16228.4 |
| glutamate mutase | DM102_23730 | Not Available | Positive | 4624645 - 4626033 | 50486.4 |
| methylaspartate mutase subunit e | DM102_23735 | Not Available | Positive | 4626052 - 4627497 | 53031.7 |
| methylaspartate ammonia-lyase | DM102_23740 | Not Available | Positive | 4627497 - 4628738 | 45550.7 |
| acyclic terpene utilization atua family protein | DM102_23745 | Not Available | Positive | 4628742 - 4630112 | 49074.5 |
| duf4387 family protein | DM102_23750 | Not Available | Positive | 4630109 - 4630426 | 11912.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





