Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylr family transcriptional regulator | DM102_23655 | Not Available | Negative | 4609644 - 4610822 | 44871.7 |
| xylose abc transporter permease | DM102_23660 | Not Available | Negative | 4610900 - 4612081 | 41033.5 |
| d-xylose abc transporter atp-binding protein | DM102_23665 | Not Available | Negative | 4612059 - 4613600 | 56443.9 |
| d-xylose abc transporter substrate-binding protein | DM102_23670 | Not Available | Negative | 4613678 - 4614670 | 35736.1 |
| xylose isomerase | DM102_23675 | Not Available | Positive | 4615036 - 4616358 | 49702.6 |
| xylulokinase | DM102_23680 | Not Available | Positive | 4616430 - 4617884 | 52670.3 |
| hypothetical protein | DM102_23685 | Not Available | Positive | 4618052 - 4618393 | 12538.0 |
| hypothetical protein | DM102_23690 | Not Available | Positive | 4618439 - 4618876 | 16137.7 |
| o-acetyltransferase | DM102_23695 | Not Available | Negative | 4618918 - 4619913 | 37481.9 |
| hypothetical protein | DM102_23700 | Not Available | Positive | 4620088 - 4620396 | 11708.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





