Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_23555 | Not Available | Negative | 4589810 - 4590001 | 7155.35 |
| addiction module toxin, hica family | DM102_23560 | Not Available | Positive | 4589976 - 4590161 | 6833.37 |
| type ii toxin-antitoxin system hicb family antitoxin | DM102_23565 | Not Available | Positive | 4590178 - 4590588 | 15242.0 |
| glycoside hydrolase family 127 protein | DM102_23570 | Not Available | Negative | 4590660 - 4592624 | 74807.7 |
| mfs transporter | DM102_23575 | Not Available | Negative | 4592635 - 4594035 | 51470.0 |
| arac family transcriptional regulator | DM102_23580 | Not Available | Positive | 4594261 - 4595076 | 31464.0 |
| l-ribulose-5-phosphate 4-epimerase sgbe | DM102_23585 | Not Available | Negative | 4595108 - 4595803 | 25532.2 |
| l-ribulose-5-phosphate 3-epimerase | DM102_23590 | Not Available | Negative | 4595797 - 4596657 | 32440.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DM102_23595 | Not Available | Negative | 4596650 - 4597312 | 23427.0 |
| carbohydrate kinase | DM102_23600 | Not Available | Negative | 4597309 - 4598805 | 55058.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





