Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DM102_22795 | Not Available | Positive | 4473401 - 4474003 | 22605.6 |
| trehalase | DM102_22800 | Not Available | Negative | 4474054 - 4475703 | 63700.1 |
| cytochrome-c peroxidase | DM102_22805 | Not Available | Positive | 4476108 - 4477505 | 51529.2 |
| glutamate decarboxylase | DM102_22810 | Not Available | Positive | 4477716 - 4478127 | 15396.2 |
| nadp-dependent isocitrate dehydrogenase | DM102_22815 | Not Available | Negative | 4478305 - 4479555 | 45776.4 |
| hypothetical protein | DM102_22820 | Not Available | Positive | 4480137 - 4480586 | 16822.5 |
| duf1493 family protein | DM102_22825 | Not Available | Positive | 4480586 - 4480921 | 13213.5 |
| 23s rrna pseudouridine(2457) synthase rlue | DM102_22830 | Not Available | Positive | 4481254 - 4481892 | 24156.9 |
| nudix hydrolase | DM102_22835 | Not Available | Positive | 4481902 - 4482363 | 17532.0 |
| trna 2-thiouridine(34) synthase mnma | DM102_22840 | Not Available | Positive | 4482417 - 4483523 | 40961.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





