Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | DM102_22035 | Not Available | Positive | 4315803 - 4316462 | 25273.7 |
| sel1 repeat family protein | DM102_22040 | Not Available | Positive | 4316776 - 4317255 | 18362.9 |
| inner membrane transport permease yhhj | DM102_22055 | Not Available | Negative | 4318173 - 4319297 | 41064.2 |
| abc transporter atp-binding protein/permease | DM102_22060 | Not Available | Negative | 4319297 - 4322032 | 100702.0 |
| biotin/lipoyl-binding protein | DM102_22065 | Not Available | Negative | 4322029 - 4323096 | 38830.6 |
| duf4049 domain-containing protein | DM102_22070 | Not Available | Negative | 4323462 - 4325084 | 61106.7 |
| duf4049 domain-containing protein | DM102_22075 | Not Available | Negative | 4325346 - 4327019 | 64188.3 |
| hypothetical protein | DM102_22080 | Not Available | Negative | 4326910 - 4327125 | 8493.76 |
| duf2776 domain-containing protein | DM102_22085 | Not Available | Positive | 4327318 - 4328370 | 37608.4 |
| nad(p)/fad-dependent oxidoreductase | DM102_22090 | Not Available | Negative | 4328685 - 4329887 | 43801.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





