Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase kdbd | DM102_21665 | Not Available | Negative | 4246306 - 4248990 | 98711.2 |
| potassium-transporting atpase subunit c | DM102_21670 | Not Available | Negative | 4248983 - 4249555 | 20322.4 |
| k(+)-transporting atpase subunit b | DM102_21675 | Not Available | Negative | 4249564 - 4251612 | 72210.6 |
| potassium-transporting atpase subunit kdpa | DM102_21680 | Not Available | Negative | 4251635 - 4253308 | 58991.4 |
| potassium-transporting atpase subunit f | DM102_21685 | Not Available | Negative | 4253308 - 4253397 | 3071.95 |
| duf2517 family protein | DM102_21690 | Not Available | Positive | 4253710 - 4253916 | 8289.03 |
| transposase | DM102_21700 | Not Available | Positive | 4254173 - 4254617 | 15972.2 |
| transcriptional regulator nrdr | DM102_21710 | Not Available | Positive | 4254941 - 4255390 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DM102_21715 | Not Available | Positive | 4255394 - 4256497 | 40437.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | DM102_21720 | Not Available | Positive | 4256586 - 4257056 | 16157.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





