Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_21365 | Not Available | Positive | 4196250 - 4196576 | 12157.8 |
| duf3927 domain-containing protein | DM102_21370 | Not Available | Positive | 4196612 - 4196743 | 4701.96 |
| is1 family transposase | DM102_21375 | Not Available | Negative | 4196816 - 4196887 | 2385.83 |
| hypothetical protein | DM102_21380 | Not Available | Positive | 4197005 - 4197154 | 5685.03 |
| octanoyltransferase | DM102_21385 | Not Available | Negative | 4197206 - 4197847 | 23898.0 |
| duf493 family protein | DM102_21390 | Not Available | Negative | 4197948 - 4198211 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | DM102_21395 | Not Available | Negative | 4198321 - 4199532 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | DM102_21400 | Not Available | Negative | 4199672 - 4200760 | 37557.1 |
| rod shape-determining protein roda | DM102_21405 | Not Available | Negative | 4200771 - 4201883 | 40478.6 |
| penicillin-binding protein 2 | DM102_21410 | Not Available | Negative | 4201886 - 4203787 | 70860.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





