Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_21200 | Not Available | Positive | 4175302 - 4175586 | 11038.9 |
| voltage-gated potassium channel protein | DM102_21205 | Not Available | Negative | 4175641 - 4176894 | 46080.2 |
| ycii family protein | DM102_21210 | Not Available | Negative | 4177195 - 4177491 | 10602.6 |
| tonb system transport protein tonb | DM102_21215 | Not Available | Positive | 4177715 - 4178434 | 26049.6 |
| acyl-coa thioesterase | DM102_21220 | Not Available | Negative | 4178474 - 4178872 | 14231.4 |
| intracellular septation protein a | DM102_21225 | Not Available | Negative | 4178977 - 4179516 | 20791.3 |
| upf0259 family protein | DM102_21230 | Not Available | Negative | 4179546 - 4180289 | 26450.6 |
| outer membrane protein ompw | DM102_21240 | Not Available | Positive | 4180646 - 4181284 | 22940.2 |
| Trna-met | Not Available | Not Available | Positive | 4195859 - 4195934 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4196036 - 4196112 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





