Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DM102_20835 | Not Available | Positive | 4105019 - 4105378 | 13737.6 |
| helix-turn-helix domain-containing protein | DM102_20840 | Not Available | Positive | 4105362 - 4105685 | 11639.2 |
| duf1198 domain-containing protein | DM102_20845 | Not Available | Negative | 4105801 - 4106253 | 17220.1 |
| ncs2 family permease | DM102_20850 | Not Available | Negative | 4106306 - 4107640 | 47012.6 |
| adenine deaminase | DM102_20855 | Not Available | Positive | 4107815 - 4109581 | 63794.2 |
| hexose phosphate transporter | DM102_20860 | Not Available | Negative | 4109628 - 4111019 | 50609.6 |
| mfs transporter family glucose-6-phosphate receptor uhpc | DM102_20865 | Not Available | Negative | 4111275 - 4112594 | 48233.3 |
| signal transduction histidine-protein kinase/phosphatase uhpb | DM102_20870 | Not Available | Negative | 4112604 - 4114106 | 56265.3 |
| dna-binding response regulator | DM102_20875 | Not Available | Negative | 4114106 - 4114696 | 20890.6 |
| hypothetical protein | DM102_20880 | Not Available | Negative | 4114858 - 4116348 | 55906.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





