Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity potassium transport system protein kup | DM102_20670 | Not Available | Positive | 4066491 - 4068359 | 69298.3 |
| d-ribose pyranase | DM102_20675 | Not Available | Positive | 4068526 - 4068945 | 15284.4 |
| ribose abc transporter atp-binding protein rbsa | DM102_20680 | Not Available | Positive | 4068953 - 4070458 | 55015.0 |
| ribose abc transporter permease | DM102_20685 | Not Available | Positive | 4070463 - 4071428 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | DM102_20690 | Not Available | Positive | 4071453 - 4072343 | 30940.2 |
| ribokinase | DM102_20695 | Not Available | Positive | 4072469 - 4073398 | 32306.4 |
| ribose operon repressor | DM102_20700 | Not Available | Positive | 4073402 - 4074394 | 36614.1 |
| mfs transporter | DM102_20705 | Not Available | Negative | 4074360 - 4075787 | 51464.9 |
| fadr family transcriptional regulator | DM102_20710 | Not Available | Negative | 4075810 - 4076502 | 26091.5 |
| antirestriction protein | DM102_20715 | Not Available | Positive | 4076964 - 4077320 | 13552.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





