Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ydfz | DM102_00370 | Not Available | Positive | 77663 - 77866 | 7276.83 |
| mannitol dehydrogenase family protein | DM102_00375 | Not Available | Negative | 77902 - 79362 | 53714.3 |
| mfs transporter | DM102_00380 | Not Available | Negative | 79451 - 80818 | 49386.8 |
| zn-dependent oxidoreductase | DM102_00385 | Not Available | Negative | 80876 - 81895 | 36566.2 |
| starvation-sensing protein rspa | DM102_00390 | Not Available | Negative | 81907 - 83121 | 45971.0 |
| hypothetical protein | DM102_00395 | Not Available | Negative | 83102 - 83290 | 7330.81 |
| ynfa family protein | DM102_00400 | Not Available | Negative | 83327 - 83653 | 11858.1 |
| duf1283 family protein | DM102_00405 | Not Available | Positive | 83788 - 84129 | 12961.4 |
| spermidine n1-acetyltransferase | DM102_00410 | Not Available | Positive | 84164 - 84724 | 21902.3 |
| ynfc family lipoprotein | DM102_00415 | Not Available | Negative | 84727 - 85437 | 26507.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





