Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | DM102_20360 | Not Available | Positive | 4003347 - 4004867 | 55230.7 |
| duf413 domain-containing protein | DM102_20365 | Not Available | Negative | 4004893 - 4005231 | 13134.2 |
| transcriptional regulator | DM102_20370 | Not Available | Positive | 4005350 - 4006189 | 31717.9 |
| Trna-trp | Not Available | Not Available | Positive | 4006284 - 4006359 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4006368 - 4006444 | Not Available |
| d-galactonate dehydratase | DM102_20390 | Not Available | Negative | 4006619 - 4007767 | 42585.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DM102_20395 | Not Available | Negative | 4007764 - 4008381 | 21457.9 |
| 2-oxo-3-deoxygalactonate kinase | DM102_20400 | Not Available | Negative | 4008365 - 4009243 | 31333.3 |
| transcriptional regulator | DM102_20405 | Not Available | Negative | 4009240 - 4009929 | 26081.1 |
| hypothetical protein | DM102_20410 | Not Available | Positive | 4010207 - 4010863 | 24079.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





