Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate wedge subunit | DM102_09705 | Not Available | Negative | 1910090 - 1910437 | 12638.3 |
| Baseplate assembly protein v | DM102_09710 | Not Available | Negative | 1910434 - 1911069 | 22140.3 |
| Tail completion protein | DM102_09715 | Not Available | Negative | 1911136 - 1911588 | 17228.9 |
| Tail completion protein | DM102_09720 | Not Available | Negative | 1911581 - 1912048 | 17396.8 |
| Lysc | DM102_09725 | Not Available | Negative | 1912011 - 1912184 | 6158.16 |
| Lysin | DM102_09730 | Not Available | Negative | 1912156 - 1912581 | 15782.0 |
| Holin | DM102_09735 | Not Available | Negative | 1912569 - 1912994 | 15556.6 |
| Endolysin | DM102_09740 | Not Available | Negative | 1913009 - 1913506 | 18569.1 |
| Holin | DM102_09745 | Not Available | Negative | 1913506 - 1913787 | 9787.61 |
| Baseplate protein x | DM102_09750 | Not Available | Negative | 1913791 - 1913994 | 7083.45 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





