Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_00210 | Not Available | Negative | 50283 - 51197 | 34751.9 |
| altronate oxidoreductase | DM102_00220 | Not Available | Negative | 51404 - 52855 | 54811.3 |
| diguanylate cyclase | DM102_00225 | Not Available | Negative | 53000 - 53131 | 5013.16 |
| ggdef domain-containing protein | DM102_00230 | Not Available | Negative | 53082 - 54029 | 34367.4 |
| duf4186 domain-containing protein | DM102_00240 | Not Available | Negative | 54639 - 54998 | 13589.6 |
| glutaminase 2 | DM102_00245 | Not Available | Negative | 54998 - 55924 | 33517.6 |
| succinate-semialdehyde dehydrogenase | DM102_00250 | Not Available | Negative | 55988 - 57376 | 49704.6 |
| lysr family transcriptional regulator | DM102_00255 | Not Available | Positive | 57477 - 58358 | 32384.8 |
| putative protein ynek | DM102_00260 | Not Available | Positive | 58436 - 59551 | 42931.8 |
| sugar efflux transporter | DM102_00265 | Not Available | Positive | 59701 - 60891 | 42574.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





