Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | DM102_18395 | Not Available | Positive | 3644692 - 3645450 | 28314.5 |
| phosphatidate cytidylyltransferase | DM102_18400 | Not Available | Positive | 3645463 - 3646320 | 31429.5 |
| sigma e protease regulator rsep | DM102_18405 | Not Available | Positive | 3646332 - 3647684 | 49122.2 |
| outer membrane protein assembly factor bama | DM102_18410 | Not Available | Positive | 3647714 - 3650146 | 90557.5 |
| chaperone protein skp | DM102_18415 | Not Available | Positive | 3650268 - 3650753 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DM102_18420 | Not Available | Positive | 3650757 - 3651782 | 36054.7 |
| beta-hydroxyacyl-acp dehydratase | DM102_18425 | Not Available | Positive | 3651887 - 3652342 | 17034.0 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | DM102_18430 | Not Available | Positive | 3652346 - 3653134 | 28081.7 |
| lipid-a-disaccharide synthase | DM102_18435 | Not Available | Positive | 3653134 - 3654282 | 42434.0 |
| ribonuclease hii | DM102_18440 | Not Available | Positive | 3654279 - 3654875 | 21511.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





