Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DM102_18070 | Not Available | Negative | 3563884 - 3564684 | 29815.5 |
| mfs transporter | DM102_18075 | Not Available | Positive | 3564914 - 3566104 | 42877.2 |
| hypothetical protein | DM102_18080 | Not Available | Positive | 3566185 - 3566835 | 25285.5 |
| 2fe-2s ferredoxin-like protein | DM102_18085 | Not Available | Negative | 3566889 - 3567143 | 9275.25 |
| ribonucleoside-diphosphate reductase 1 subunit beta | DM102_18090 | Not Available | Negative | 3567143 - 3568273 | 43519.6 |
| ribonucleoside-diphosphate reductase subunit alpha | DM102_18095 | Not Available | Negative | 3568362 - 3570647 | 85722.9 |
| aida-i family autotransporter yfal | DM102_18105 | Not Available | Positive | 3571343 - 3575071 | 130083.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | DM102_18110 | Not Available | Negative | 3575132 - 3575854 | 26557.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | DM102_18115 | Not Available | Positive | 3576001 - 3578628 | 97008.4 |
| duf2138 domain-containing protein | DM102_18120 | Not Available | Positive | 3578777 - 3580465 | 62770.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





