Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose lipid a transferase | DM102_17970 | Not Available | Negative | 3539698 - 3541350 | 62503.9 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | DM102_17975 | Not Available | Negative | 3541350 - 3542240 | 33020.5 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DM102_17980 | Not Available | Negative | 3542237 - 3544219 | 74218.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DM102_17985 | Not Available | Negative | 3544219 - 3545187 | 36368.4 |
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | DM102_17990 | Not Available | Negative | 3545191 - 3546330 | 41613.3 |
| histidine phosphatase family protein | DM102_17995 | Not Available | Positive | 3546638 - 3547240 | 22291.8 |
| nucleoside triphosphatase nudi | DM102_18000 | Not Available | Negative | 3547279 - 3547704 | 16343.6 |
| hypothetical protein | DM102_18005 | Not Available | Positive | 3547983 - 3548525 | 18569.6 |
| competence/damage-inducible protein cina | DM102_18010 | Not Available | Positive | 3548625 - 3549827 | 44286.3 |
| iclr family transcriptional regulator | DM102_18015 | Not Available | Positive | 3550047 - 3550829 | 29064.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





