Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endoribonuclease cas2 | DM102_17810 | Not Available | Negative | 3512629 - 3512922 | 10976.3 |
| type i-e crispr-associated endonuclease cas1 | DM102_17815 | Not Available | Negative | 3512919 - 3513842 | 33426.7 |
| type i-e crispr-associated protein cas6/cse3/case | DM102_17820 | Not Available | Negative | 3513839 - 3514489 | 24756.7 |
| type i-e crispr-associated protein cas5/casd | DM102_17825 | Not Available | Negative | 3514471 - 3515217 | 28621.0 |
| type i-e crispr-associated protein cas7/cse4/casc | DM102_17830 | Not Available | Negative | 3515228 - 3516283 | 38394.6 |
| type i-e crispr-associated protein cse2/casb | DM102_17835 | Not Available | Negative | 3516298 - 3516834 | 20687.6 |
| type i-e crispr-associated protein cse1/casa | DM102_17840 | Not Available | Negative | 3516831 - 3518393 | 59119.5 |
| crispr-associated helicase/endonuclease cas3 | DM102_17845 | Not Available | Negative | 3518491 - 3521190 | 101871.0 |
| hok/gef family protein | DM102_17850 | Not Available | Negative | 3521385 - 3521537 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | DM102_17860 | Not Available | Negative | 3521802 - 3522536 | 28007.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





