Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | DM102_17660 | Not Available | Positive | 3482915 - 3484036 | 41367.7 |
| hydrogenase expression/formation protein hype | DM102_17665 | Not Available | Positive | 3484033 - 3485043 | 35066.5 |
| formate hydrogenlyase transcriptional activator flha | DM102_17670 | Not Available | Positive | 3485117 - 3487195 | 78415.4 |
| transporter | DM102_17675 | Not Available | Positive | 3487201 - 3487668 | 15912.4 |
| nitrous oxide-stimulated promoter family protein | DM102_17680 | Not Available | Negative | 3487707 - 3488051 | 13609.8 |
| dna mismatch repair protein muts | DM102_17685 | Not Available | Positive | 3488338 - 3490899 | 95309.5 |
| protein-serine/threonine phosphatase | DM102_17690 | Not Available | Positive | 3491005 - 3491661 | 25254.9 |
| deor/glpr transcriptional regulator | DM102_17695 | Not Available | Negative | 3491712 - 3492479 | 27408.2 |
| nad(p)-dependent oxidoreductase | DM102_17700 | Not Available | Positive | 3492675 - 3493583 | 30693.0 |
| four-carbon acid sugar kinase family protein | DM102_17705 | Not Available | Positive | 3493580 - 3494842 | 44887.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





