Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuob | DM102_17610 | Not Available | Negative | 3474222 - 3474989 | 27999.7 |
| 4fe-4s dicluster domain-containing protein | DM102_17615 | Not Available | Negative | 3474989 - 3475531 | 20329.4 |
| formate hydrogenlyase subunit 5 | DM102_17620 | Not Available | Negative | 3475541 - 3477250 | 64984.1 |
| hydrogenase 3 membrane subunit | DM102_17625 | Not Available | Negative | 3477268 - 3478191 | 33093.5 |
| formate hydrogenlyase subunit 3 | DM102_17630 | Not Available | Negative | 3478194 - 3480020 | 64069.1 |
| formate hydrogenlyase subunit 2 | DM102_17635 | Not Available | Negative | 3480017 - 3480628 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | DM102_17640 | Not Available | Negative | 3480753 - 3481214 | 17627.9 |
| protein hypa | DM102_17645 | Not Available | Positive | 3481426 - 3481776 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | DM102_17650 | Not Available | Positive | 3481780 - 3482652 | 31566.8 |
| hydrogenase assembly protein hypc | DM102_17655 | Not Available | Positive | 3482643 - 3482915 | 9732.58 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





