Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikb | DM102_17055 | Not Available | Positive | 3375719 - 3376663 | 35250.3 |
| nickel abc transporter permease subunit nikc | DM102_17060 | Not Available | Positive | 3376660 - 3377493 | 30363.8 |
| nickel import atp-binding protein nikd | DM102_17065 | Not Available | Positive | 3377493 - 3378257 | 26845.2 |
| nickel import atp-binding protein nike | DM102_17070 | Not Available | Positive | 3378254 - 3379060 | 29718.5 |
| nickel-responsive transcriptional regulator nikr | DM102_17075 | Not Available | Positive | 3379065 - 3379466 | 15094.7 |
| hypothetical protein | DM102_17080 | Not Available | Negative | 3379588 - 3379794 | 7673.22 |
| chaperone protein clpb | DM102_17085 | Not Available | Negative | 3380217 - 3382790 | 95590.8 |
| peptidoglycan editing factor pgef | DM102_17090 | Not Available | Negative | 3382920 - 3383651 | 26305.4 |
| ribosomal large subunit pseudouridine synthase d | DM102_17095 | Not Available | Negative | 3383648 - 3384628 | 37109.8 |
| outer membrane protein assembly factor bamd | DM102_17100 | Not Available | Positive | 3384763 - 3385500 | 27830.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





