Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_16540 | Not Available | Negative | 3264670 - 3265575 | 33509.4 |
| tryptophan--trna ligase | DM102_16545 | Not Available | Negative | 3265736 - 3266740 | 37439.9 |
| phosphoglycolate phosphatase | DM102_16550 | Not Available | Negative | 3266733 - 3267491 | 27435.8 |
| ribulose-phosphate 3-epimerase | DM102_16555 | Not Available | Negative | 3267484 - 3268161 | 24555.7 |
| adenine-specific dna-methyltransferase | DM102_16560 | Not Available | Negative | 3268179 - 3269015 | 32087.2 |
| cell division protein damx | DM102_16565 | Not Available | Negative | 3269122 - 3270408 | 46148.3 |
| 3-dehydroquinate synthase | DM102_16570 | Not Available | Negative | 3270500 - 3271588 | 38856.3 |
| shikimate kinase | DM102_16575 | Not Available | Negative | 3271645 - 3272166 | 19539.2 |
| dna transporter hofq | DM102_16580 | Not Available | Negative | 3272568 - 3273806 | 44724.9 |
| duf2531 family protein | DM102_16585 | Not Available | Negative | 3273718 - 3274122 | 15007.9 |
Pathways
12657 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





