Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycie/ycif family protein | DM102_16285 | Not Available | Positive | 3219922 - 3220422 | 18598.2 |
| ferritin-like domain-containing protein | DM102_16290 | Not Available | Positive | 3220468 - 3220974 | 18986.5 |
| tail fiber assembly protein | DM102_16300 | Not Available | Negative | 3221748 - 3222017 | 10411.1 |
| class i sam-dependent methyltransferase | DM102_16305 | Not Available | Positive | 3222116 - 3222742 | 22961.5 |
| nucleocapsid protein | DM102_16310 | Not Available | Negative | 3222687 - 3222824 | 5261.65 |
| tail fiber assembly protein | DM102_16315 | Not Available | Negative | 3222797 - 3223381 | 21727.2 |
| hypothetical protein | DM102_16320 | Not Available | Negative | 3223381 - 3226407 | 99889.0 |
| ail/lom family protein | DM102_16325 | Not Available | Negative | 3226559 - 3227158 | 21818.1 |
| host specificity protein j | DM102_16330 | Not Available | Negative | 3227226 - 3229429 | 79767.4 |
| elongation factor tu | DM102_16335 | Not Available | Negative | 3229430 - 3229766 | 11959.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





