Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | DM102_15190 | Not Available | Positive | 2999531 - 3000508 | 34697.8 |
| arabinose 5-phosphate isomerase kdsd | DM102_15195 | Not Available | Positive | 3000522 - 3001508 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | DM102_15200 | Not Available | Positive | 3001529 - 3002095 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | DM102_15205 | Not Available | Positive | 3002092 - 3002667 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | DM102_15210 | Not Available | Positive | 3002636 - 3003193 | 20128.1 |
| abc transporter atp-binding protein | DM102_15215 | Not Available | Positive | 3003200 - 3003925 | 26802.3 |
| rna polymerase sigma-54 factor | DM102_15220 | Not Available | Positive | 3003973 - 3005406 | 53996.8 |
| ribosome hibernation promoting factor | DM102_15225 | Not Available | Positive | 3005429 - 3005716 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | DM102_15230 | Not Available | Positive | 3005834 - 3006325 | 17960.6 |
| rnase adaptor protein rapz | DM102_15235 | Not Available | Positive | 3006371 - 3007225 | 32494.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





