Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scp2 domain-containing protein | DM102_14990 | Not Available | Negative | 2960162 - 2960686 | 19673.0 |
| collagenase | DM102_14995 | Not Available | Positive | 2960895 - 2961890 | 37035.2 |
| u32 family peptidase | DM102_15000 | Not Available | Positive | 2961899 - 2962777 | 32537.1 |
| llm class flavin-dependent oxidoreductase | DM102_15005 | Not Available | Positive | 2962858 - 2963865 | 37157.5 |
| tryptophan permease | DM102_15010 | Not Available | Negative | 2963983 - 2965227 | 44427.4 |
| dead/deah box family atp-dependent rna helicase | DM102_15015 | Not Available | Negative | 2965381 - 2967270 | 70550.5 |
| protein yrbn | DM102_15020 | Not Available | Negative | 2967263 - 2967343 | 2979.59 |
| lipoprotein nlpi | DM102_15025 | Not Available | Negative | 2967450 - 2968334 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | DM102_15030 | Not Available | Negative | 2968443 - 2970578 | 77119.6 |
| 30s ribosomal protein s15 | DM102_15035 | Not Available | Negative | 2970825 - 2971094 | 10269.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





