Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DM102_14515 | Not Available | Positive | 2874701 - 2876446 | 65567.5 |
| rna polymerase subunit sigma | DM102_14520 | Not Available | Positive | 2876460 - 2876582 | 4564.46 |
| rna polymerase sigma factor rpod | DM102_14525 | Not Available | Positive | 2876641 - 2878482 | 70211.2 |
| mismatch-specific dna-glycosylase | DM102_14530 | Not Available | Negative | 2878561 - 2879067 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 2879192 - 2879267 | Not Available |
| siderophore-interacting protein | DM102_14540 | Not Available | Negative | 2879321 - 2880085 | 28874.0 |
| hypothetical protein | DM102_14545 | Not Available | Negative | 2880109 - 2880291 | 7525.36 |
| padr family transcriptional regulator | DM102_14550 | Not Available | Positive | 2880362 - 2880985 | 23416.7 |
| pas domain s-box protein | DM102_14555 | Not Available | Negative | 2881092 - 2882612 | 55116.1 |
| hypothetical protein | DM102_14560 | Not Available | Positive | 2882888 - 2883094 | 7711.07 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





