Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_14255 | Not Available | Negative | 2832682 - 2832879 | 7460.0 |
| ygit-type zinc finger protein | DM102_14260 | Not Available | Negative | 2832879 - 2833274 | 14703.9 |
| mrna interferase mqsr | DM102_14265 | Not Available | Negative | 2833276 - 2833572 | 11232.6 |
| transcriptional regulator | DM102_14270 | Not Available | Negative | 2833777 - 2834259 | 17828.2 |
| tigr00156 family protein | DM102_14275 | Not Available | Negative | 2834312 - 2834704 | 14011.5 |
| two-component system response regulator qseb | DM102_14280 | Not Available | Positive | 2834856 - 2835515 | 24689.2 |
| two-component sensor histidine kinase | DM102_14285 | Not Available | Positive | 2835512 - 2836861 | 50284.7 |
| duf2645 domain-containing protein | DM102_14290 | Not Available | Negative | 2836907 - 2837239 | 13187.7 |
| modulator of drug activity b | DM102_14300 | Not Available | Positive | 2837558 - 2838139 | 21892.1 |
| quinol monooxygenase ygin | DM102_14305 | Not Available | Positive | 2838170 - 2838484 | 11533.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





