Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | DM102_13520 | Not Available | Negative | 2662178 - 2664340 | 80749.7 |
| type i secretion c-terminal target domain-containing protein | DM102_13525 | Not Available | Negative | 2664344 - 2685118 | 688916.0 |
| transporter | DM102_13530 | Not Available | Negative | 2685227 - 2686582 | 49299.9 |
| amino acid permease | DM102_13535 | Not Available | Negative | 2686919 - 2688211 | 45685.6 |
| glutaminase | DM102_13540 | Not Available | Negative | 2688214 - 2689146 | 32946.3 |
| copper-exporting p-type atpase copa | DM102_13545 | Not Available | Positive | 2689409 - 2691913 | 87931.4 |
| hypothetical protein | DM102_13555 | Not Available | Positive | 2692342 - 2693136 | 29831.1 |
| hypothetical protein | DM102_13560 | Not Available | Positive | 2693049 - 2693324 | 10253.9 |
| cys-trna(pro) deacylase | DM102_13565 | Not Available | Positive | 2693340 - 2693819 | 17093.9 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | DM102_13570 | Not Available | Negative | 2693856 - 2695508 | 60676.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





