Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein ybcj | DM102_13315 | Not Available | Positive | 2622264 - 2622476 | 7403.98 |
| metal-dependent hydrolase | DM102_13320 | Not Available | Positive | 2622584 - 2623105 | 19495.6 |
| cysteine--trna ligase | DM102_13325 | Not Available | Negative | 2623141 - 2624526 | 52186.9 |
| peptidylprolyl isomerase b | DM102_13330 | Not Available | Positive | 2624700 - 2625194 | 18184.5 |
| udp-2,3-diacylglucosamine hydrolase | DM102_13335 | Not Available | Positive | 2625197 - 2625919 | 26867.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DM102_13345 | Not Available | Positive | 2626037 - 2626546 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DM102_13350 | Not Available | Positive | 2626543 - 2627610 | 39481.4 |
| carbamate kinase | DM102_13355 | Not Available | Negative | 2627747 - 2628640 | 31689.1 |
| duf2877 domain-containing protein | DM102_13360 | Not Available | Negative | 2628637 - 2629452 | 29696.0 |
| duf1116 domain-containing protein | DM102_13365 | Not Available | Negative | 2629463 - 2630722 | 44982.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





