Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) sensor histidine kinase cuss | DM102_13200 | Not Available | Positive | 2595612 - 2597060 | 54151.7 |
| type vi secretion system tip protein vgrg | DM102_13205 | Not Available | Positive | 2597797 - 2599698 | 71345.9 |
| duf1795 domain-containing protein | DM102_13210 | Not Available | Positive | 2599726 - 2600187 | 17319.4 |
| rhs repeat protein | DM102_13220 | Not Available | Positive | 2601320 - 2602840 | 57657.4 |
| rhs repeat protein | DM102_13230 | Not Available | Positive | 2603735 - 2605069 | 50646.5 |
| hypothetical protein | DM102_13235 | Not Available | Positive | 2605066 - 2605317 | 9574.72 |
| isas1 family transposase | DM102_13240 | Not Available | Positive | 2605847 - 2606983 | 43235.0 |
| bacteriophage n4 adsorption protein b | DM102_13245 | Not Available | Positive | 2607254 - 2609491 | 85338.3 |
| phage receptor | DM102_13250 | Not Available | Positive | 2609478 - 2612450 | 111366.0 |
| duf4434 family protein | DM102_13255 | Not Available | Positive | 2612451 - 2613341 | 33046.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





