Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | Positive | 2445488 - 2445568 | Not Available |
| hypothetical protein | DM102_12435 | Not Available | Positive | 2445558 - 2445803 | 8878.0 |
| hypothetical protein | DM102_12440 | Not Available | Negative | 2445820 - 2446491 | 24853.9 |
| duf1471 domain-containing protein | DM102_12445 | Not Available | Positive | 2446638 - 2446913 | 9929.94 |
| propionate catabolism operon regulatory protein prpr | DM102_12450 | Not Available | Negative | 2447014 - 2448600 | 58582.8 |
| methylisocitrate lyase | DM102_12455 | Not Available | Positive | 2448839 - 2449729 | 32109.4 |
| 2-methylcitrate synthase | DM102_12460 | Not Available | Positive | 2449774 - 2450943 | 43136.6 |
| 2-methylcitrate dehydratase | DM102_12465 | Not Available | Positive | 2450977 - 2452428 | 53996.8 |
| propionate--coa ligase | DM102_12470 | Not Available | Positive | 2452468 - 2454354 | 69409.8 |
| cytosine permease | DM102_12475 | Not Available | Positive | 2454591 - 2455850 | 43680.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





