Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | DM102_12385 | Not Available | Positive | 2433699 - 2435117 | 50421.0 |
| carbamate kinase | DM102_12390 | Not Available | Positive | 2435213 - 2436163 | 33986.9 |
| deaminase | DM102_12395 | Not Available | Positive | 2436173 - 2437555 | 50521.4 |
| asch domain-containing protein | DM102_12400 | Not Available | Positive | 2437824 - 2438264 | 16473.7 |
| autoinducer 2 abc transporter substrate-binding protein | DM102_12405 | Not Available | Positive | 2438515 - 2439501 | 35672.3 |
| sugar abc transporter atp-binding protein | DM102_12410 | Not Available | Positive | 2439535 - 2441034 | 54934.6 |
| abc transporter permease | DM102_12415 | Not Available | Positive | 2441027 - 2441998 | 34841.6 |
| abc transporter permease | DM102_12420 | Not Available | Positive | 2441995 - 2442951 | 33817.8 |
| nad(p)-dependent alcohol dehydrogenase | DM102_12425 | Not Available | Positive | 2443038 - 2444087 | 38033.7 |
| hypothetical protein | DM102_12430 | Not Available | Positive | 2444330 - 2445145 | 31786.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





