Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_11895 | Not Available | Negative | 2340563 - 2340787 | 8476.09 |
| type vi secretion system contractile sheath small subunit | DM102_11900 | Not Available | Negative | 2340822 - 2341322 | 18015.4 |
| type vi secretion system tube protein hcp | DM102_11905 | Not Available | Positive | 2342019 - 2342537 | 19256.8 |
| hypothetical protein | DM102_11910 | Not Available | Positive | 2342570 - 2342707 | 5097.35 |
| type vi secretion system tip protein vgrg | DM102_11915 | Not Available | Positive | 2342747 - 2344888 | 79525.8 |
| hypothetical protein | DM102_11925 | Not Available | Positive | 2349464 - 2349841 | 14109.8 |
| isas1 family transposase | DM102_11930 | Not Available | Positive | 2350062 - 2351186 | 42533.2 |
| amidohydrolase | DM102_11940 | Not Available | Negative | 2351611 - 2352381 | 28972.5 |
| inhibitor of vertebrate lysozyme | DM102_11945 | Not Available | Positive | 2352535 - 2353008 | 16873.2 |
| acyl-coa dehydrogenase | DM102_11950 | Not Available | Negative | 2353051 - 2355495 | 89186.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





