Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | DM102_11790 | Not Available | Negative | 2317224 - 2317691 | 17597.9 |
| dna polymerase iii subunit epsilon | DM102_11795 | Not Available | Positive | 2317756 - 2318487 | 27130.5 |
| hypothetical protein | DM102_11800 | Not Available | Negative | 2318376 - 2318606 | 8483.46 |
| Trna-asp | Not Available | Not Available | Positive | 2318620 - 2318696 | Not Available |
| hypothetical protein | DM102_11810 | Not Available | Positive | 2319026 - 2319811 | 29668.2 |
| hypothetical protein | DM102_11820 | Not Available | Negative | 2320436 - 2321350 | 34000.4 |
| type vi secretion system tube protein hcp | DM102_11825 | Not Available | Negative | 2321394 - 2321876 | 18034.6 |
| hypothetical protein | DM102_11830 | Not Available | Negative | 2321900 - 2323252 | 50814.7 |
| type vi secretion system membrane subunit tssm | DM102_11835 | Not Available | Negative | 2323263 - 2326727 | 132026.0 |
| type vi secretion system protein tssa | DM102_11840 | Not Available | Negative | 2326806 - 2328218 | 52281.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





