Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DM102_11055 | Not Available | Negative | 2179018 - 2179752 | 27777.8 |
| hypothetical protein | DM102_11060 | Not Available | Negative | 2179749 - 2180081 | 12260.6 |
| type iii secretion system needle complex protein | DM102_11065 | Not Available | Negative | 2180101 - 2180340 | 9038.44 |
| prgh/eprh family type iii secretion apparatus protein | DM102_11070 | Not Available | Negative | 2180354 - 2181544 | 45522.0 |
| luxr family transcriptional regulator | DM102_11075 | Not Available | Positive | 2181794 - 2182294 | 19131.0 |
| invasion protein | DM102_11080 | Not Available | Positive | 2182296 - 2182589 | 11161.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | DM102_11085 | Not Available | Negative | 2182659 - 2183771 | 43001.9 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | DM102_11090 | Not Available | Negative | 2183780 - 2184547 | 28155.7 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | DM102_11095 | Not Available | Negative | 2184549 - 2184809 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | DM102_11100 | Not Available | Negative | 2184819 - 2185484 | 24526.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





