Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein syd | DM102_10690 | Not Available | Negative | 2106404 - 2106949 | 20679.5 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DM102_10695 | Not Available | Positive | 2107017 - 2107865 | 32531.1 |
| log family protein ygdh | DM102_10700 | Not Available | Positive | 2107977 - 2109341 | 50975.0 |
| haaap family serine/threonine permease | DM102_10705 | Not Available | Positive | 2109897 - 2111186 | 46936.3 |
| l-serine ammonia-lyase | DM102_10710 | Not Available | Positive | 2111244 - 2112611 | 48701.8 |
| flap endonuclease xni | DM102_10715 | Not Available | Positive | 2112722 - 2113477 | 28194.8 |
| lactaldehyde reductase | DM102_10720 | Not Available | Negative | 2113532 - 2114680 | 40515.7 |
| l-fuculose-phosphate aldolase | DM102_10725 | Not Available | Negative | 2114708 - 2115355 | 23786.7 |
| l-fucose-proton symporter | DM102_10730 | Not Available | Positive | 2115902 - 2117218 | 47547.6 |
| l-fucose isomerase | DM102_10735 | Not Available | Positive | 2117251 - 2119026 | 65010.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





