Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DM102_10110 | Not Available | Negative | 1990962 - 1991723 | 26859.4 |
| multidrug resistance outer membrane protein mdtq | DM102_10115 | Not Available | Negative | 1991776 - 1993212 | 52191.0 |
| hypothetical protein | DM102_10125 | Not Available | Positive | 1993436 - 1993519 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | DM102_10135 | Not Available | Negative | 1993892 - 1994839 | 35259.6 |
| hypothetical protein | DM102_10140 | Not Available | Positive | 1995078 - 1995476 | 14579.6 |
| cidb/lrgb family autolysis modulator | DM102_10145 | Not Available | Positive | 1995473 - 1996168 | 24471.1 |
| cytidine deaminase | DM102_10150 | Not Available | Positive | 1996298 - 1997182 | 31568.6 |
| protein sana | DM102_10155 | Not Available | Positive | 1997332 - 1998051 | 27288.5 |
| duf2542 family protein | DM102_10160 | Not Available | Positive | 1998054 - 1998293 | 9273.62 |
| hypothetical protein | DM102_10165 | Not Available | Negative | 1998374 - 1998622 | 9068.14 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





