Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_10060 | Not Available | Positive | 1980182 - 1980289 | 3642.85 |
| abc transporter permease | DM102_10065 | Not Available | Negative | 1980270 - 1981001 | 25572.2 |
| abc transporter atp-binding protein | DM102_10070 | Not Available | Negative | 1981006 - 1981932 | 34371.6 |
| abc transporter permease | DM102_10075 | Not Available | Negative | 1981925 - 1983082 | 41228.3 |
| abc transporter substrate-binding protein | DM102_10080 | Not Available | Negative | 1983089 - 1984006 | 32500.9 |
| beta-glucosidase bglx | DM102_10085 | Not Available | Negative | 1984155 - 1986452 | 83578.9 |
| d-lactate dehydrogenase | DM102_10090 | Not Available | Positive | 1986648 - 1988363 | 64629.9 |
| d-alanyl-d-alanine endopeptidase | DM102_10095 | Not Available | Negative | 1988402 - 1989334 | 33889.4 |
| yip1 family protein | DM102_10100 | Not Available | Negative | 1989508 - 1990095 | 21678.0 |
| deda family protein | DM102_10105 | Not Available | Positive | 1990265 - 1990843 | 21422.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





