Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal resistance protein | DM102_09950 | Not Available | Positive | 1947415 - 1947753 | 12521.9 |
| pilus assembly protein | DM102_09955 | Not Available | Negative | 1947835 - 1948869 | 37210.5 |
| fimbrial biogenesis outer membrane usher protein | DM102_09960 | Not Available | Negative | 1948880 - 1951360 | 92335.1 |
| fimbrial assembly protein | DM102_09965 | Not Available | Negative | 1951376 - 1952050 | 24836.3 |
| type 1 fimbrial protein | DM102_09970 | Not Available | Negative | 1952131 - 1952673 | 19075.6 |
| hypothetical protein | DM102_09975 | Not Available | Positive | 1952862 - 1953044 | 7108.65 |
| duf2574 family protein | DM102_09980 | Not Available | Negative | 1952968 - 1953249 | 10121.1 |
| protein mrp | DM102_09985 | Not Available | Negative | 1953512 - 1954621 | 39940.4 |
| methionine--trna ligase | DM102_09990 | Not Available | Positive | 1954753 - 1956786 | 76304.9 |
| duf4132 domain-containing protein | DM102_09995 | Not Available | Positive | 1956927 - 1960724 | 143390.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





